Zhu, Y., Kumar, S., Menon, A. L., Scott, R. A. and Adams, M. W. W. (2013) "Regulation of Iron Metabolism by Pyrococcus furiosus" J. Bacteriol. (in press)

del Campo, J. S. M., Rollin, J., Myung, S., Chun, Y., Chandrayan, S., Patiño, R. Adams, M. W. W. and Zhang, Y.-H. (2013) "High-yield dihydrogen production from xylose through cell-free synthetic cascade enzymes" Angew. Chemie (in press)

Keller, M., Schut, G. J., Lipscomb, G. L., Menon, A., Iwuchukwu, I., Leuko, T., Thorgersen, M. P., Nixon, W. J., Hawkins, A., Kelly, R. M. and Adams, M. W. W. (2013) "Exploiting microbial hyperthermophilicity to produce an industrial chemical using hydrogen and carbon dioxide" Proc. Natl. Acad. Sci. U.S.A. (in press)

Hawkins, A. S., McTernan, P., Lian, H., Kelly, R. M. and Adams, M. W.W. (2013) "Biological conversion of carbon dioxide and hydrogen into liquid fuels and industrial chemicals" Curr. Opin. Biotechnol. (in press)

Kamali, S., Wang, H., Mitra, D., Ogata, H., Lubitz, H., Manor, B. C., Rauchfuss, T. B., Byrne, D., Bonnefoy, V., Jenney, F. E., Adams, M. W. W., Yoda, Y., Alp, E., Zhao, J. and Cramer, S. P. (2013) "Observation of the Fe-CN and Fe-CO vibrations in the active site of [NiFe] hydrogenase by nuclear resonance vibrational spectroscopy" Angew. Chemie 52, 724-728

Alahuhta, M., Brunecky, R., Chandrayan, P., Kataeva, I., Adams, M. W. W., Himmel, M. E. and Lunin, V. V. (2013) "The structure and mode of action of Caldicellulosiruptor bescii family 3 pectate lyase In biomass deconstruction" Acta. Crystallography (in press)

Pang, W. L., Kaur. A., Ratushny, A. V., Cvetkovic, A., Kumar, S., Pan, M., Arkin, A. P., Aitchison, J. D., Adams, M. W. W. and Baliga, N. S. (2013) "Metallochaperones regulate intracellular Cu levels" PLOS Comput. Biol. 9, e1002880

Thorgersen, M. P., Stirrett, K., Scott, R. A. and Adams, M. W. W. (2012) "Mechanism of oxygen detoxification by the surprisingly oxygen-tolerant hyperthermophilic Archaeon, Pyrococcus furiosus" Proc. Natl. Acad. Sci. USA 109, 18547-18552

Guo, Y., Brecht, E., Aznavour, K., Nix, J. C., Xiao, Y., Wang, H., George, S. J., Bau, R., Keable, S., Peters, J. W., Adams, M. W. W., Jenney, F. E., Sturhahn, W., Alp, E. E., Zhao , J., Yoda, Y. and Cramer, S. P. (2012) "Nuclear resonance vibrational spectroscopy (NRVS) of rubredoxin and MoFe protein crystals" Hyperfine Interact. DOI: 10.1007/s10751-012-0643-2

Crécy-Lagard, V., Phillips, G, Grochowski, L. L. , Yacoubi, B. E., Jenney, F. E., Adams, M. W. W., Murzin A. G. and White, R. H. (2012) "Comparative genomics guided discovery and confirmation of two missing archaeal enzyme families involved in the biosynthesis of the pterin moiety of methanopterin and tetrahydrofolate" ACS Chem. Biol. 7, 1807-1816

Hawkins, A. S., Han, Y., Bennett, R. K., Adams, M. W. W. and Kelly, R. M. (2013) "Role of 4-hydroxybutyrate-CoA synthetase in the CO2 fixation cycle in thermoacidophilic archaea" J. Biol. Chem. 288, 4012-4022

Schut, G. J., Boyd, E. S., Peters, J. W and Adams, M. W. W. (2012) "The modular respiratory complexes involved in hydrogen and sulfur metabolism by heterotrophic hyperthermophilic archaea and their evolutionary implications" FEMS Microbiol. Rev. 37, 182-203

Han, Y., Hawkins, A., Adams, M. W. W. and Kelly, R. M. (2012) "Epimerase (Msed_0639) and mutase (Msed_0638, Msed_2055) convert (S)-methylmalonyl-CoA to succinyl-CoA in the Metallosphaera sedula 3-hydroxypropionate/4-hydroxybutyrate cycle" Appl. Environ. Microbiol. 78, 6194-6202

Bridger, S. L, Lancaster, W. A., Poole, F. L., Schut, G. J. and Adams, M. W. W. (2012) "Genome sequencing of a genetically-tractable Pyrococcus furiosus strain reveals a highly dynamic genome" J. Bacteriol. 194, 4097-4106

Blumer-Schuette, S. E, Giannone, R. J., Zurawski, J.V., Ozdemir, I., Ma, Q., Yin, Y., Xu, Y., Kataeva, I., Poole, F. L., Adams, M. W. W., Hamilton-Brehm, S. D., Elkins, J. G., Larimer, F. W., Land, M. L., Hauser, L., Cottingham, R. W., Hettich, R. L. and Kelly, R. M. (2012) "Caldicellulosiruptor core and pan genomes reveal determinants for non-cellulosomal thermophilic deconstruction of plant biomass" J. Bacteriol. 194, 4105-4028

Schut, G. J., Nixon, W. J., Lipscomb, G. L., Scott, R. A. and Adams, M. W. W. (2012) "Mutational analyses of the enzymes involved in the metabolism of hydrogen by the hyperthermophilic archaeon Pyrococcus furiosus" Frontiers in Microbiology 3, 163 (epub)

Vaccaro, B. J., Menon, A. L., Lancaster, W. A. and Adams, M. W. W. (2012) "Metallomics using Inductively Coupled Plasma Mass Spectrometry" Current Protocols in Chemical Biology, 249–274 DOI: 10.1002/9780470559277.ch120031

Farkas, J., Stirrett, K., Lipscomb, G., Nixon, W., Scott, R. A., Adams, M. W. W. and Westpheling, J. (2012) "The recombinogenic properties of the Pyrococcus furiosus COM1 strain enable rapid selection of targeted mutants" Appl. Environ. Microbiol. 78, 4669-4676

Basen, M., Sun, J. and Adams, M. W. W. (2012) "Engineering a hyperthermophilic archaeon for temperature-dependent product formation" mBio 3, e00053-12

Chandrayan, S. K., McTernan, P. M., Hopkins, R. C., Sun, J., Jenney, F. E. and Adams, M. W. W. (2011) "Engineering the hyperthermophilic archaeon Pyrococcus furiosus to overproduce its cytoplasmic [NiFe]-Hydrogenase" J. Biol. Chem. 287, 3257-3264

Hawkins, A. S., Han, Y. J., Lian, H., Loder, A. J., Menon, A. L., Iwuchukwu, I. J., Keller, M., Leuko, T. T., Adams, M. W. W. and Kelly, R. M. (2011) "Extremely thermophilic routes to microbial electrofuels" ACS Catalysis 1, 1043-1050

Yannone, S. M., Hartung, S., Menon, A. L., Adams, M. W. and Tainer, J. A. (2011) "Metals in biology: defining metalloproteomes" Curr. Opin. Biotechnol. 23, 89-95

Hopkins, R. C., Sun, J., Jenney, F. E., Chandrayan, S. K., McTernan, P. M. and Adams, M. W. W. (2011) "Homologous expression of a subcomplex of Pyrococcus furiosus hydrogenase that interacts with pyruvate ferredoxin oxidoreductase" PLoS ONE 6, e26569, Oct 24 (epub).

Bridger, S. L., Clarkson, S. M., Stirrett, K., DeBarry, M. D., Lipscomb, G. L., Schut, G. J., Westpheling, J., Scott, R. A., Adams, M. W. W. (2011) "Deletion strains reveal metabolic roles for key elemental sulfur responsive proteins in Pyrococcus furiosus". J. Bacteriol. 193, 6498-6504

Alahuhta, M., Chandrayan, P., Kataeva, I., Adams, M. W. W., Himmel, M. E. and Lunin, V. V. (2011) "The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii" Acta Cryst. 67, 1498-1500

Yoon, S. H., Reiss, J. R., Bare, J. C., Tenenbaum, D., Pan, M., Slagel, J., Lim, S., Hackett, M., Menon, A. L., Adams, M. W. W., Yannone, S. M., Leigh, J. A., and Baliga, N. S. (2011) "Parallel evolution of transcriptome structure during genome reorganization" Genome Research 21, 1892-1904

Holden, J. F., Menon, A. L. and Adams, M. W. W. (2011) "Hyperthermophile-metal interactions in hydrothermal vent environments" In: Microbial Metal and Metalloid Metabolism: Advances and Applications, Stolz J. F. and Oremland, R. S., Eds., pp. 39-62, ASM Press, Washington, DC

Farkas, J., Chung, D., DeBarry, M., Adams, M. W. W. and Westpheling, J. (2011) Defining the minimum components of the chromosomal origin of replication of the hyperthermophilic anaerobe, Pyrococcus furiosus, required for construction of a stable replicating shuttle vector" Appl. Environ. Microbiol. 77, 6343-6349

Dillard, B. D., Demick, J. M., Adams, M. W. W. and Lanzilotta, W. N. (2011) "A cryo-crystallographic time course for peroxide reduction by rubrerythrin from Pyrococcus furiosus" J. Biol. Inorg. Chem. 16, 949-959

Blumer-Schuette, S.E., Ozdemir, I., Mistry, D., Lucas, S., Lapidus, A., Cheng, J.F., Goodwin, L.A., Pitluck, S.L., Hauser, L.J., Woyke, T., Mikhailova, N., Pati, A., Kyrpides, N.C., Ivanova, N., Detter, J.C., Walston-Davenport, K., Han, S., Adams, M.W.W. and Kelly, R.M. (2011) "Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus." J Bacteriol. 193, 1483-1484.

Mitra, D., Pelmenschikov, W., Guo, Y., Case, D. A., Wang, H., Dong, W., Jenney, F. E., Adams, M. W. W. and Cramer, S. P. (2011) Dynamics of the [4Fe-4S] cluster in Pyrococcus furiosus ferredoxin via nuclear resonance vibrational spectroscopy (NRVS) and resonance Raman spectroscopy - quantitative simulation by density functional theory calculations" Biochemistry 50, 5220-5235

Lancaster, W. A., Praismann, J. L., Poole, F. L., Cvetkovic, A., Menon, A. L., Scott, J. W., Poole, F. L., Jenney, F. E., Thorgersen, M., Kalisiak, E., Apon, J. V., Trauger, S. A., Siuzdak, G., Tainer, J. A. and Adams, M. W. W. (2011) "A computational framework for proteome-wide pursuit and prediction of metalloproteins using ICP-MS and MS/MS data" BMC Bioformatics 12, 64 (Web Site)

Lipscomb, G. L., Stirrett, K., Schut, G. J., Yang, F., Jenney, F. E, Jr., Scott, R. A., Adams, M. W. W. and Westpheling, J. (2011) "Natural competence in the hyperthermophilic archaeon Pyrococcus furiosus facilitates genetic manipulation: use for constructing multiple markerless deletions of genes encoding two cytoplasmic hydrogenases" Appl. Environ. Microbiol. 77, 2232-2238

Dam, P., Kataeva, I., Yang, S.-J., Zhou, F, Yin, Y., Chou, W., Poole, F. L., Westpheling, J., Hettich, R., Giannone, R., Lewis, D. L. , Kelly, R. M., Gilbert, H. J., Henrissat, B., Xu, Y. and Adams, M. W. W. (2011) "Insights into plant biomass to biofuel conversion from the genome sequence of the extremely thermophilic bacterium Caldicellulosiruptor bescii DSM 6725" Nucleic Acids Res. 39, 3240-3254

Clarkson, S. M., Newcomer, E. C., Young, E. G. and Adams, M. W. W. (2010) "The elemental sulfur responsive protein (SipA) from the hyperthermophilic archaeon Pyrococcus furiosus is regulated by sulfide in an iron-dependent manner" J. Bacteriol. 192, 5841-5843

Lancaster, W. A. and Adams, M. W. W. (2010) "The influence of environment and metabolic capacity on the size of a microorganism" The Minimal Cell: The Biophysics of Cell Compartment and the Origin of Cell Functionality, Luisi, P. L. and Stano, P. (eds.), Springer, New York (in press)

Cvetkovic, A., Menon, A. L., Thorgersen, M., Scott, J. W., Poole, F. L., Jenney, F. E., Lancaster, W. A., Praismann, J. L., Shanmukh, S., Vaccaro, B., Trauger, S. A., Kalisiak, E., Apon, J. V., Siuzdak, G., Yannone, S. M., Tainer, J. A. and Adams, M. W. W. (2010) "Microbial metalloproteomes are largely uncharacterized" Nature 466, 779-782

Yang, H., Lipscomb, G. L., Keese, A. M., Schut, G. J., Thomm, M., Adams, M. W. W., Wang, B. C., and Scott, R. A., (2010) "SurR regulates hydrogen production in Pyrococcus furiosus by a sulfur-dependent redox switch" Mole. Microbiol. 77, 1111-1122

Sun, J., Hopkins, R. C., Jenney, F. E., McTernan, P. M. and Adams, M. W. W. (2010) "Heterologous expression and maturation of an NADP-dependent [NiFe]-hydrogenase: a key enzyme in biofuel production" PLoS ONE 5, e10526

Tonzetich, Z., J., Wang, H., Mehta, D., Tinberg, C. E., Do, L., Jenney, F. E., Adams, M. W. W., Cramer, S. P. and Lippard, S. J. (2010) "Identification of protein-bound dinitrosyl iron complexes by nuclear resonance vibrational spectrsocopy" J. Am. Chem. Soc. 132, 6914-6916

Strand, K. R., Sun, C., Li, T., Jenney, F. E., Jr., Schut, G. and Adams, M. W. W. (2010) "Oxidative stress response induced by hydrogen peroxide in the hyperthermophilic archaeon Pyrococcus furiosus and in related species" Arch. Microbiol. 192, 447-459

Keese, A. M., Schut, G. J., Ouhammouch, M., Adams, M. W. W. and Thomm, M. (2010) "Genome-wide identification of targets for the archaeal heat-shock regulator Phr by cell-free transcription of genomic DNA" J. Bacteriol. 192, 1292-1298

Yang, S.-J., Kataeva, I., Wiegel, J., Yin, Y., Dam, P., Xu, Y., Westpheling, J. and Adams, M. W. W. (2009) "Reclassification of 'Anaerocellum thermophilum' DSM 6725 as Caldicellulosiruptor bescii strain DSM 6725T sp. nov" Int. J. Syst. Evol. Microbiol. 60, 2011-2015.

Yang, S.-J., Kataeva, I., Hamilton-Brehm, S. D., Engle, N. E., Tschaplinski, T. J., Doeppke, C., Davis, M., Westpheling, J. and Adams, M. W. W. (2009) "Efficient degradation of lignocellulosic plant biomass without pretreatment by the thermophilic anaerobe, Anaerocellum thermophilum DMS 6725" Appl. Environ. Microbiol. 75, 4762-4769

Baker, S. E., Hopkins, R. C., Blanchette, C. D., Walsworth, V. L., Sumbad, R., Fischer, N. O., Kuhn, E. A., Coleman, M., Chromy, B. A., Létant, S. E., Hoeprich, P. D., Adams, M. W. W., and Henderson, P. T. (2009) "Hydrogen production by a hyperthermophilic membrane-bound hydrogenase in soluble nanolipoprotein particles" J. Am. Chem. Soc. 131, 7508-7509

Hura, G. L., Menon, A. L., Hammel, M., Rambo, R., Poole, F. L., Tsutakawa, S., Jenney, F. E., Classen, S., Frankel, L., Hopkins, R. C., Yang, S.-J., Scott, J. W., Dillard, B. D., Adams, M. W. W. and Tainer, J. A. (2009) "Rapid and robust proteomics-scale structural analyses determined by x-ray solution scattering (SAXS)"  Nature Methods 6, 606 - 612

Schut, G. J. and Adams, M. W. W. (2009) "The iron-hydrogenase of Thermotoga maritima uses ferredoxin and NADH synergistically: a new perspective on anaerobic hydrogen production" J. Bacteriol. 191, 4451-4457

Present-301

300-251

250-201

200-151

150-101

100-51

50-1